Dr Paul Muhindira
This person does not currently hold a position at QUT.
Personal details
Keywords
Bioinformatics, Phylogenetics, Machine Learning, Structural Bioinformatics, Genome/Transcriptome assembly and annotation, Metabolomics
Research field
Plant Biology, Agricultural Biotechnology
Field of Research code, Australian and New Zealand Standard Research Classification (ANZSRC), 2008
Qualifications
- Doctor of Philosophy (University of Queensland)
Publications
- Appels, R., Eversole, K., Stein, N., Feuillet, C., Keller, B., Rogers, J., Pozniak, C., Choulet, F., Distelfeld, A., Poland, J., Ronen, G., Sharpe, A., Barad, O., Baruch, K., Keeble-gagnère, G., Mascher, M., Ben-zvi, G., Josselin, A., Himmelbach, A., Balfourier, F., Gutierrez-gonzalez, J., Hayden, M., Koh, C., Muehlbauer, G., Pasam, R., Paux, E., Rigault, P., Tibbits, J., Tiwari, V., Spannagl, M., Lang, D., Gundlach, H., Haberer, G., Mayer, K., Ormanbekova, D., Prade, V., Šimková, H., Wicker, T., Swarbreck, D., Rimbert, H., Felder, M., Guilhot, N., Kaithakottil, G., Keilwagen, J., Leroy, P., Lux, T., Twardziok, S., Venturini, L., Juhász, A., Abrouk, M., Fischer, I., Uauy, C., Borrill, P., Ramirez-gonzalez, R., Arnaud, D., Chalabi, S., Chalhoub, B., Cory, A., Datla, R., Davey, M., Jacobs, J., Robinson, S., Steuernagel, B., Van Ex, F., Wulff, B., Benhamed, M., Bendahmane, A., Concia, L., Latrasse, D., Bartoš, J., Bellec, A., Berges, H., Doležel, J., Frenkel, Z., Gill, B., Korol, A., Letellier, T., Olsen, O., Singh, K., Valárik, M., Van Der Vossen, E., Vautrin, S., Weining, S., Fahima, T., Glikson, V., Raats, D., Cíhalíková, J., Toegelová, H., Vrána, J., Sourdille, P., Darrier, B., Barabaschi, D., Cattivelli, L., Hernandez, P., Galvez, S., Budak, H., Jones, J., Witek, K., Yu, G., Small, I., Melonek, J., Zhou, R., Belova, T., Kanyuka, K., King, R., Nilsen, K., Walkowiak, S., Cuthbert, R., Knox, R., Wiebe, K., Xiang, D., Rohde, A., Golds, T., Cížková, J., Akpinar, B., Biyiklioglu, S., Gao, L., N’daiye, A., Kubaláková, M., Šafár, J., Alfama, F., Adam-blondon, A., Flores, R., Guerche, C., Loaec, M., Quesneville, H., Condie, J., Ens, J., Maclachlan, R., Tan, Y., Alberti, A., Aury, J., Barbe, V., Couloux, A., Cruaud, C., Labadie, K., Mangenot, S., Wincker, P., Kaur, G., Luo, M., Sehgal, S., Chhuneja, P., Gupta, O., Jindal, S., Kaur, P., Malik, P., Sharma, P., Yadav, B., Singh, N., Khurana, J., Chaudhary, C., Khurana, P., Kumar, V., Mahato, A., Mathur, S., Sevanthi, A., Sharma, N., Tomar, R., Holušová, K., Plíhal, O., Clark, M., Heavens, D., Kettleborough, G., Wright, J., Balcárková, B., Hu, Y., Salina, E., Ravin, N., Skryabin, K., Beletsky, A., Kadnikov, V., Mardanov, A., Nesterov, M., Rakitin, A., Sergeeva, E., Handa, H., Kanamori, H., Katagiri, S., Kobayashi, F., Nasuda, S., Tanaka, T., Wu, J., Cattonaro, F., Jiumeng, M., Kugler, K., Pfeifer, M., Sandve, S., Xun, X., Zhan, B., Batley, J., Bayer, P., Edwards, D., Hayashi, S., Tulpová, Z., Visendi, P., Cui, L., Du, X., Feng, K., Nie, X., Tong, W. & Wang, L. (2018). Shifting the limits in wheat research and breeding using a fully annotated reference genome. Science, 361(6403). https://eprints.qut.edu.au/205179
- Chan, C., Rosic, N., Lorenc, M., Visendi, P., Lin, M., Kaniewska, P., Ferguson, B., Gresshoff, P., Batley, J. & Edwards, D. (2019). A differential k-mer analysis pipeline for comparing RNA-Seq transcriptome and meta-transcriptome datasets without a reference. Functional and Integrative Genomics, 19(2), 363–371.
- Visendi, P., Ng'ang'a, W., Bulimo, W., Bishop, R., Ochanda, J. & De Villiers, E. (2011). TparvaDB: A database to support Theileria parva vaccine development. Database, 2011, 1–5. https://eprints.qut.edu.au/136178
- Visendi, P., Berkman, P., Hayashi, S., Golicz, A., Bayer, P., Ruperao, P., Hurgobin, B., Montenegro, J., Chan, C., Stankova, H., Batley, J., Simkova, H., Dolezel, J. & Edwards, D. (2016). An efficient approach to BAC based assembly of complex genomes. Plant Methods, 12(1), 1–9. https://eprints.qut.edu.au/106880
- Visendi, P., Batley, J. & Edwards, D. (2014). Next generation sequencing and germplasm resources. In R. Tuberosa, A. Graner & E. Frison (Eds.), Genomics of Plant Genetic Resources: Volume 1. Managing, Sequencing and Mining Genetic Resources (pp. 369–390). Springer. https://eprints.qut.edu.au/136190/
- Berkman, P., Visendi, P., Lee, H., Stiller, J., Manoli, S., Lorenc, M., Lai, K., Batley, J., Fleury, D., Simkova, H., Kubalakova, M., Weining, S., Dolezel, J. & Edwards, D. (2013). Dispersion and domestication shaped the genome of bread wheat. Plant Biotechnology Journal, 11(5), 564–571. https://eprints.qut.edu.au/107346
- Visendi, P., Batley, J. & Edwards, D. (2013). Next generation characterisation of cereal genomes for marker discovery. Biology, 2(4), 1357–1377.
- Luo, M., Toegelová, H., Visendi, P., Hayashi, S., Vojta, P., Paux, E., Kilian, A., Abrouk, M., Bartoš, J., Hajdúch, M., Batley, J., Edwards, D., Doležel, J., Šimková, H. & Tulpová, Z. (2019). Integrated physical map of bread wheat chromosome arm 7DS to facilitate gene cloning and comparative studies. New Biotechnology, 48, 12–19. https://eprints.qut.edu.au/180244
QUT ePrints
For more publications by Paul, explore their research in QUT ePrints (our digital repository).